Reading all of this makes me think that I got pretty lucky with my 6(?) (Yeah I never counted) rocks. They all seem to be in places I don't need (yet) *touches wood.
Now things that annoy me:
- You remove designs on the ground with the same button you use to pick up items. Whats up with me always removing my paths when I want to pick up fruit or a flower?
- You can only store ten designs per character. Storing them in the larger storage removes them from my town so I have to make so many characters I don't know what to do with or where to put their house, just to make nice paths... And in combination with the point above: I have to switch characters when I accidentally remove a path, thats usually a couple of minutes extra work per day...
- You have to move through 16 villagers to get a dreamie back when you accidentally lost them.... This can be pure agony without amiibo cards and if you don't want to loose the other villagers.
- You are not always notified before it's too late that a villager wants to leave. It would be much nicer if, considering you take the time to play at least once a day, you will get at least informed by Isabelle once that someone plans to move OR you can change their mind on the day they leave. They could add that villagers have to hand in a form if they want to leave the town, so can just check the town hall once a day and ask Isabelle if someone has handed in something like that.
- The fact that you can't act against stupid "design"-choices your villagers make. Mine always sell their stuff if I don't block off retail so their houses end up almost empty. Then suddenly they start wearing the UGLIEST shirt but refuse to change it.... I want to have simpler options of giving them a new shirt or changing out a pice of furniture in their home...
- You don't have enough storage to keep every non-catalogue item in the game. I know that storage should be limited.... But I want to be able to at least keep everything I can't get again...
- That items you cannot repurchase aren't always marked. I have to check the catalogue often just to make sure I can sell something..
- Probably the thing I hated from the beginning of New Leaf is that they cut the gyroid storage. It was my favourite feature added in city folk and I liked how it added more personality to Brewster and how it solved my issue what to do with the gyroids since I didnt want to sell them. Now I have to try to fit them all into my museum even though i could probably find a better thing to display there...
I'm sure there are many more but these came to mind right now.